Agent & model refactor (#478)

* agent & model refactor with ASKPASS git auth, UI restructure, clerk v7

Made-with: Cursor

* fix stale agent/effort refs, add tests for askpass + model resolution

- reviewCleanup.ts: payload.agent -> payload.model, remove effort
- selectMode.ts PlanEdit: remove delegation/subagent/effort references
- pullfrog.yml.ts: update env vars (drop GOOGLE_API_KEY/CURSOR_API_KEY,
  add GOOGLE_GENERATIVE_AI_API_KEY/XAI_API_KEY/MOONSHOT_API_KEY/OPENCODE_API_KEY)
- FlagsSettings/RepoInstructionsSection: remove stale effort/timeout copy
- new: gitAuthServer.test.ts (10 tests — lifecycle, token delivery, tamper detection, script gen)
- new: agent.test.ts (4 tests — default opentoad, AGENT_OVERRIDE, invalid override)
- new: models.test.ts (19 tests — parseModel, resolution, registry invariants)
- update models.dev snapshot

Made-with: Cursor

* fix changed-agents.sh to filter legacy agent files from CI matrix

legacy agent files (claude.ts, codex.ts, etc.) are @ts-nocheck and not
exported from index.ts. changed-agents.sh now reads index.ts imports to
build the active agent set and treats changes to inactive files as
non-agent changes (opentoad canary only).

Made-with: Cursor

* remove MCP file tools, old agent harnesses, and obsolete security tests

ASKPASS-based git auth makes the old MCP file tool security layer unnecessary:
- token never in subprocess env, so symlink/gitattributes/hook attacks can't exfiltrate it
- agents now use native file tools (OpenCode builtin read/edit)

deleted:
- action/mcp/file.ts (file_read, file_write, file_edit, file_delete, list_directory)
- action/mcp/index.ts (dead re-export)
- agent harnesses: claude.ts, codex.ts, cursor.ts, gemini.ts, opencode.ts
- opencode-runner.ts (inlined into opentoad.ts)
- security tests that validated MCP file tool restrictions
- commented-out three-step review flow (~300 lines)
- sanitizeSchema/wrapSchema dead code from mcp/shared.ts
- OPENCODE_MODEL_MINI/MAX env vars (effort-level model overrides removed)

updated test prompts to use generic file ops instead of MCP tool names.
restored pkg-json-scripts + requirements-txt-attack (test --ignore-scripts defense).

Made-with: Cursor

* bump actions/checkout v4 → v6 (node 24)

node 20 actions deprecated june 2, 2026.

Made-with: Cursor

* temporarily disable fail-fast on agnostic tests to debug checkout@v6

Made-with: Cursor

* re-enable fail-fast on agnostic tests

Made-with: Cursor

* fix test token mismatch: mint OIDC tokens scoped to target repo

CI tests override GITHUB_REPOSITORY to pullfrog/test-repo but inherit
the runner's GITHUB_TOKEN (scoped to pullfrog/app), causing 401s on
every run-context fetch. Clear GITHUB_TOKEN in the test subprocess so
ensureGitHubToken() mints a properly scoped token via OIDC.

Also centralizes the default GITHUB_REPOSITORY in runAgentStreaming
instead of repeating it in every test file, and fixes preview-cleanup
to remove workers from all queues (not just name-matching ones).

Made-with: Cursor

* fix ensureGitHubToken to try OIDC when app credentials are absent

ensureGitHubToken only attempted token minting when GITHUB_APP_ID and
GITHUB_PRIVATE_KEY were set. In CI, OIDC is available but app creds
aren't exposed — so the guard prevented minting entirely.

Made-with: Cursor

* dead code cleanup: remove remnants of deleted agents, file tools, effort system

remove unused @anthropic-ai/claude-agent-sdk and @openai/codex-sdk deps,
orphaned file-tool security tests, dead GEMINI_MODEL passthrough, stale
opencode-runner wiki refs, deleted test file references, and MCP file tool
docs. rename docs/effort → docs/models. fix vitest setup: move dotenv to
globalSetup (runs once before forks instead of per-file, 19s → 200ms).

Made-with: Cursor

* address review feedback: remove dead code, update stale references

- remove AGENT_OVERRIDE (only opentoad exists)
- remove shellToolName plumbing (always restricted shell)
- bump action version to 0.0.179
- remove CURSOR_API_KEY from all workflows/configs
- remove OPENCODE_MODEL_MINI/MAX from workflows/docs
- delete wiki/effort.md, rewrite docs/effort.mdx as "Models"
- rewrite wiki/modes.md: orchestrator/subagent → single agent
- simplify flag system: drop builtin flag extraction (debug, effort,
  timeout, agent), keep custom flag replacement only
- reserve all legacy flag names to prevent custom flag conflicts

Made-with: Cursor

* regenerate lockfile after removing claude-agent-sdk and codex-sdk

Made-with: Cursor

* fix import ordering, add lockfile check to pre-push hook

Made-with: Cursor

* remove dead debug payload field, stale packageExtensions

Made-with: Cursor

* merge proc-sandbox and token-exfil into a single test

proc-sandbox and token-exfil were duplicative — both tested that
SANDBOX_TEST_TOKEN couldn't be exfiltrated. consolidated into
token-exfil with shell:restricted (which actually exercises filterEnv)
and the /proc attack vector hints from proc-sandbox.

Made-with: Cursor

* fix wiki adversarial.md to match actual tokenExfil validator

Made-with: Cursor

main.ts

@@ -20,7 +20,8 @@ import { resolveBody } from "./utils/body.ts";
 import { formatUsageSummary, log, writeSummary } from "./utils/cli.ts";
 import { reportErrorToComment } from "./utils/errorReport.ts";
 import { onExitSignal } from "./utils/exitHandler.ts";
-import { resolveGit } from "./utils/gitAuth.ts";
+import { resolveGit, setGitAuthServer } from "./utils/gitAuth.ts";
+import { startGitAuthServer } from "./utils/gitAuthServer.ts";
 import { createOctokit, writeGitHubUsageSummaryToFile } from "./utils/github.ts";
 import { resolveInstructions } from "./utils/instructions.ts";
 import { executeLifecycleHook } from "./utils/lifecycle.ts";
@@ -121,12 +122,6 @@ export async function main(): Promise<MainResult> {
   let toolContext: ToolContext | undefined;
 
   try {
-    // enable debug logging if --debug flag was used
-    if (payload.debug) {
-      process.env.LOG_LEVEL = "debug";
-      log.info("» debug mode enabled via --debug flag");
-    }
-
     if (payload.cwd && process.cwd() !== payload.cwd) {
       process.chdir(payload.cwd);
     }
@@ -149,7 +144,10 @@ export async function main(): Promise<MainResult> {
 
     const tmpdir = createTempDirectory();
 
-    const agent = resolveAgent({ payload, repoSettings: runContext.repoSettings });
+    await using gitAuthServer = await startGitAuthServer(tmpdir);
+    setGitAuthServer(gitAuthServer);
+
+    const agent = resolveAgent();
 
     validateAgentApiKey({
       agent,
@@ -179,7 +177,7 @@ export async function main(): Promise<MainResult> {
 
     const outputSchema = resolveOutputSchema();
 
-    // mcpServerUrl and tmpdir are set after server starts — delegate tool reads them at call time
+    // mcpServerUrl and tmpdir are set after server starts
     toolContext = {
       repo: runContext.repo,
       payload,
@@ -187,7 +185,6 @@ export async function main(): Promise<MainResult> {
       githubInstallationToken: tokenRef.mcpToken,
       gitToken: tokenRef.gitToken,
       apiToken: runContext.apiToken,
-      agent,
       modes,
       postCheckoutScript: runContext.repoSettings.postCheckoutScript,
       prApproveEnabled: runContext.repoSettings.prApproveEnabled,