Fixed semantic conflict between #377 and #354 (#380)

* Move out checking out PRs from `etupGit` (#377 intent)

* Keep subagent-related changes from #377

entry

@@ -144201,7 +144201,7 @@ function initToolState(params) {
   return {
     progressCommentId: resolvedId,
     subagents: /* @__PURE__ */ new Map(),
-    activeSubagentId: void 0,
+    selfSubagentId: void 0,
     backgroundProcesses: /* @__PURE__ */ new Map(),
     usageEntries: []
   };
@@ -144379,12 +144379,13 @@ async function startMcpHttpServer(ctx) {
     }
   };
 }
-async function startSubagentMcpServer(ctx) {
+async function startSubagentMcpServer(params) {
   const subagentToolState = {
-    ...ctx.toolState,
+    ...params.ctx.toolState,
+    selfSubagentId: params.subagentId,
     backgroundProcesses: /* @__PURE__ */ new Map()
   };
-  const subagentCtx = { ...ctx, toolState: subagentToolState };
+  const subagentCtx = { ...params.ctx, toolState: subagentToolState };
   const tools = buildSubagentTools(subagentCtx);
   const startResult = await selectMcpPort(subagentCtx, tools);
   return { url: startResult.url, stop: () => startResult.server.stop() };
@@ -147464,12 +147465,7 @@ async function setupGit(params) {
   $("git", ["remote", "set-url", "origin", originUrl], { cwd: repoDir });
   params.toolState.pushUrl = originUrl;
   $("git", ["config", "--local", "credential.helper", ""], { cwd: repoDir });
-  if (params.event.is_pr !== true || !params.event.issue_number) {
+  log.info("\xBB git authentication configured");
-    log.info("\xBB git authentication configured");
-    return;
-  }
-  const prNumber = params.event.issue_number;
-  await checkoutPrBranch(prNumber, params);
 }
 
 // utils/time.ts

mcp/server.ts

@@ -25,6 +25,7 @@ export type SubagentStatus = "running" | "completed" | "failed";
 
 export type SubagentState = {
   id: string;
+  label: string;
   status: SubagentStatus;
   mode: string;
   stdoutFilePath: string;
@@ -46,8 +47,9 @@ export interface ToolState {
   selectedMode?: string;
   // per-subagent lifecycle tracking (keyed by subagent uuid)
   subagents: Map<string, SubagentState>;
-  // set while a subagent is running — routes set_output to the correct subagent and prevents nesting
+  // only set on subagent shallow copies — routes set_output to the owning subagent.
-  activeSubagentId: string | undefined;
+  // never set on the orchestrator's shared state.
+  selfSubagentId: string | undefined;
   backgroundProcesses: Map<string, BackgroundProcess>;
   review?: {
     id: number;
@@ -81,7 +83,7 @@ export function initToolState(params: InitToolStateParams): ToolState {
   return {
     progressCommentId: resolvedId,
     subagents: new Map(),
-    activeSubagentId: undefined,
+    selfSubagentId: undefined,
     backgroundProcesses: new Map(),
     usageEntries: [],
   };
@@ -391,21 +393,30 @@ export type ManagedMcpServer = {
   stop: () => Promise<void>;
 };
 
+type StartSubagentMcpServerParams = {
+  ctx: ToolContext;
+  subagentId: string;
+};
+
 /**
  * Start a per-subagent MCP server (common tools only — no push/PR/delegation).
  * Each subagent gets its own server; call stop() when the subagent completes.
  *
  * The subagent gets its own shallow copy of toolState so scalar writes
  * (pushUrl, pushDest, selectedMode, etc.) don't mutate the orchestrator's state.
+ * selfSubagentId is set on the copy so set_output routes to the correct subagent.
  * Shared references (subagents Map, usageEntries array, dependencyInstallation)
  * are intentionally shared for coordination (set_output routing, usage tracking).
  */
-export async function startSubagentMcpServer(ctx: ToolContext): Promise<ManagedMcpServer> {
+export async function startSubagentMcpServer(
+  params: StartSubagentMcpServerParams
+): Promise<ManagedMcpServer> {
   const subagentToolState: ToolState = {
-    ...ctx.toolState,
+    ...params.ctx.toolState,
+    selfSubagentId: params.subagentId,
     backgroundProcesses: new Map(),
   };
-  const subagentCtx: ToolContext = { ...ctx, toolState: subagentToolState };
+  const subagentCtx: ToolContext = { ...params.ctx, toolState: subagentToolState };
   const tools = buildSubagentTools(subagentCtx);
   const startResult = await selectMcpPort(subagentCtx, tools);
   return { url: startResult.url, stop: () => startResult.server.stop() };

utils/setup.ts

@@ -2,8 +2,7 @@ import { execSync } from "node:child_process";
 import { mkdtempSync } from "node:fs";
 import { tmpdir } from "node:os";
 import { join } from "node:path";
-import type { PayloadEvent, ShellPermission } from "../external.ts";
+import type { ShellPermission } from "../external.ts";
-import { checkoutPrBranch } from "../mcp/checkout.ts";
 import type { ToolState } from "../mcp/server.ts";
 import { log } from "./cli.ts";
 import type { OctokitWithPlugins } from "./github.ts";
@@ -59,9 +58,7 @@ export interface GitContext {
   postCheckoutScript: string | null;
 }
 
-export interface SetupGitParams extends GitContext {
+export type SetupGitParams = GitContext;
-  event: PayloadEvent;
-}
 
 /**
  * setup git configuration and authentication for the repository.
@@ -170,16 +167,5 @@ export async function setupGit(params: SetupGitParams): Promise<void> {
   // disable credential helpers to prevent prompts and ensure clean auth state
   $("git", ["config", "--local", "credential.helper", ""], { cwd: repoDir });
 
-  // non-PR events: stay on default branch
+  log.info("» git authentication configured");
-  if (params.event.is_pr !== true || !params.event.issue_number) {
-    log.info("» git authentication configured");
-    return;
-  }
-
-  // PR event: checkout PR branch using shared helper
-  const prNumber = params.event.issue_number;
-
-  // use shared checkout helper (handles fork remotes, push config, post-checkout hook)
-  // this updates toolState.pushUrl for fork PRs and sets toolState.issueNumber
-  await checkoutPrBranch(prNumber, params);
 }